Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-940 in SMCL Lung Bhattacharjee Cluster 2 Table contains all genes in the SMCL Lung Bhattacharjee cluster number 2. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-940 9575 CLOCK clock homolog (mouse) [Source:HGNC Symbol;Acc:2082] T 11165 NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3 [Source:HGNC Symbol;Acc:8050] T 9697 TRAM2 translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:16855] T 9672 SDC3 syndecan 3 [Source:HGNC Symbol;Acc:10660] zzz999 1445 CSK c-src tyrosine kinase [Source:HGNC Symbol;Acc:2444] zzz999 6548 SLC9A1 solute carrier family 9 (sodium/hydrogen exchanger), member 1 [Source:HGNC Symbol;Acc:11071] T 9600 PITPNM1 phosphatidylinositol transfer protein, membrane-associated 1 [Source:HGNC Symbol;Acc:9003] zzz999 25865 PRKD2 protein kinase D2 [Source:HGNC Symbol;Acc:17293] zzz999 113419 TEX261 testis expressed 261 [Source:HGNC Symbol;Acc:30712] T 23351 KHNYN KH and NYN domain containing [Source:HGNC Symbol;Acc:20166] T 23170 TTLL12 tubulin tyrosine ligase-like family, member 12 [Source:HGNC Symbol;Acc:28974] zzz999 6612 SUMO3 SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:11124] T 1944 EFNA3 ephrin-A3 [Source:HGNC Symbol;Acc:3223] zzz999 8402 SLC25A11 solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:HGNC Symbol;Acc:10981] zzz999 8517 IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:HGNC Symbol;Acc:5961] T 4580 MTX1 metaxin 1 [Source:HGNC Symbol;Acc:7504] zzz999 9538 EI24 etoposide induced 2.4 mRNA [Source:HGNC Symbol;Acc:13276] T 10906 TRAFD1 TRAF-type zinc finger domain containing 1 [Source:HGNC Symbol;Acc:24808] zzz999 6536 SLC6A9 solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:HGNC Symbol;Acc:11056] zzz999 7172 TPMT thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:12014] T 23214 XPO6 exportin 6 [Source:HGNC Symbol;Acc:19733] T 6692 SPINT1 serine peptidase inhibitor, Kunitz type 1 [Source:HGNC Symbol;Acc:11246] T 23038 WDTC1 WD and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:29175] T 9718 ECE2 endothelin converting enzyme 2 [Source:HGNC Symbol;Acc:13275] P T 54039 PCBP3 poly(rC) binding protein 3 [Source:HGNC Symbol;Acc:8651] T 10567 RABAC1 Rab acceptor 1 (prenylated) [Source:HGNC Symbol;Acc:9794] zzz999 2002 ELK1 ELK1, member of ETS oncogene family [Source:HGNC Symbol;Acc:3321] P T 5689 PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 [Source:HGNC Symbol;Acc:9537] zzz999 1717 DHCR7 7-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:2860] T 7138 TNNT1 troponin T type 1 (skeletal, slow) [Source:HGNC Symbol;Acc:11948] zzz999 5514 PPP1R10 protein phosphatase 1, regulatory (inhibitor) subunit 10 [Source:HGNC Symbol;Acc:9284] zzz999 4956 ODF1 outer dense fiber of sperm tails 1 [Source:HGNC Symbol;Acc:8113] zzz999 1108 CHD4 chromodomain helicase DNA binding protein 4 [Source:HGNC Symbol;Acc:1919] zzz999 3993 LLGL2 lethal giant larvae homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:6629] zzz999 7141 TNP1 transition protein 1 (during histone to protamine replacement) [Source:HGNC Symbol;Acc:11951] zzz999 55611 OTUB1 OTU domain, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:23077] T 10279 PRSS16 protease, serine, 16 (thymus) [Source:HGNC Symbol;Acc:9480] zzz999 9742 IFT140 intraflagellar transport 140 homolog (Chlamydomonas) [Source:HGNC Symbol;Acc:29077] T 9721 GPRIN2 G protein regulated inducer of neurite outgrowth 2 [Source:HGNC Symbol;Acc:23730] zzz999 1642 DDB1 damage-specific DNA binding protein 1, 127kDa [Source:HGNC Symbol;Acc:2717] zzz999 4355 MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) [Source:HGNC Symbol;Acc:7220] T 26030 PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3 [Source:HGNC Symbol;Acc:20364] T 5630 PRPH peripherin [Source:HGNC Symbol;Acc:9461] zzz999 2813 GP2 glycoprotein 2 (zymogen granule membrane) [Source:HGNC Symbol;Acc:4441] zzz999 10525 HYOU1 hypoxia up-regulated 1 [Source:HGNC Symbol;Acc:16931] T 1938 EEF2 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:3214] zzz999 686 BTD biotinidase [Source:HGNC Symbol;Acc:1122] zzz999 65055 REEP1 receptor accessory protein 1 [Source:HGNC Symbol;Acc:25786] zzz999 9167 COX7A2L cytochrome c oxidase subunit VIIa polypeptide 2 like [Source:HGNC Symbol;Acc:2289] T 10423 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Source:HGNC Symbol;Acc:1769] T 23463 ICMT isoprenylcysteine carboxyl methyltransferase [Source:HGNC Symbol;Acc:5350] T 9189 ZBED1 zinc finger, BED-type containing 1 [Source:HGNC Symbol;Acc:447] T 9146 HGS hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:4897] T 200081 TXLNA taxilin alpha [Source:HGNC Symbol;Acc:30685] T 5571 PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9385] zzz999 10425 ARIH2 ariadne homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:690] T 10980 COPS6 COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis) [Source:HGNC Symbol;Acc:21749] zzz999 9028 RHBDL1 rhomboid, veinlet-like 1 (Drosophila) [Source:HGNC Symbol;Acc:10007] zzz999 25895 METTL21B methyltransferase like 21B [Source:HGNC Symbol;Acc:24936] T 9362 CPNE6 copine VI (neuronal) [Source:HGNC Symbol;Acc:2319] zzz999 10202 DHRS2 dehydrogenase/reductase (SDR family) member 2 [Source:HGNC Symbol;Acc:18349] zzz999

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